eNews

#04 2020

Satellite monitoring beyond the forest edge

By Jasper Slingsby and Glenn Moncrieff, SAEON Fynbos Node

Advances in the availability of satellite earth observation data and processing tools allow for near real-time monitoring and study of ecosystems.

Unfortunately, most research is focused on forests, with little attention given to “open” non-forest ecosystems such as the shrublands, woodlands and grasslands that dominate most of Sub-Saharan Africa and much of the world.

These ecosystems contain a substantial proportion of the world’s biodiversity and organic carbon, among other important variables. Near-real time tools can be a game-changer for the sustainable management and stewardship of these ecosystems and their benefits to society.

Detecting abnormal change in forests is usually straightforward because they are typically relatively stable over timescales from years to centuries. Open ecosystems are far more challenging, due to noisy natural dynamism such as strong seasonality, high sensitivity to rainfall and fire.

Testing their approach on the Cape Peninsula, the researchers found that it is useful for identifying a range of change agents such as fire, alien plant species invasions, drought, pathogen outbreaks and clearing of vegetation (Picture: Adam Wilson)

The king protea, South Africa’s national flower, is found in the Cape Floristic region. Near-real time tools can be a game-changer for the sustainable management and stewardship of this ecosystem and its benefits to society (Picture: Adam Wilson)

Detecting changes in the state of Fynbos ecosystems

A team of SAEON researchers recently published an innovative approach that overcomes these difficulties in Fynbos by using a model to generate forecasts of the expected vegetation signal observed by satellite under natural conditions. This allows us to detect changes in the state of Fynbos ecosystems by identifying areas where the observed vegetation signal has deviated from the modelled expectation for healthy natural ecosystems.

The core model is a mathematical function that allows one to estimate the shape of the expected post-fire recovery trajectory (over roughly 10 to 50 years) and seasonality for a given site (see Figures 1 & 3). The exact shape of the curve varies predictably among sites based on their climate, topography and soils and is estimated from the observed satellite record and the environmental data.

Figure 1: A postfire recovery trajectory following a fire in the year 2000. The blue line indicates the observed satellite signal of vegetation health, while the dark and light gray ribbons indicate uncertainty bounds in the model projections. Vegetation “greenness” (NDVI) recovers rapidly over the first few years and then saturates as the plant canopy becomes relatively continuous. Observations that exceed the model bounds suggest either an abnormal change event or (occasionally) error in the satellite data. See Figure 6 of the paper for more examples.

Advances in the availability of satellite earth observation data and processing tools allow for near real-time monitoring and study of ecosystems (Picture: Adam Wilson)

Knowing the shape of the curve allows us to predict the expected natural range in vegetation signal for any given site so long as we know the environmental parameters (climate, topography and soils), time of year and fire history. While this core model is specific to ecosystems with multi-year fire cycles, similar models can easily be developed for other open ecosystems.

Testing our approach on the Cape Peninsula found that it is useful for identifying a range of change agents such as fire, alien plant species invasions, drought, pathogen outbreaks and clearing of vegetation. We have developed a prototype interactive web application (Figure 2), but the next step is to fully automate the workflow and work with end users (conservation managers, environmental compliance officers, etc.) to develop this into a full production near-real time change-detection system.

Figure 2. A prototype of our vegetation-monitoring web application shows areas where vegetation deviates from our model expectation and allows users to interactively explore data and view recent remote sensing imagery.

A wildfire rips through dry Fynbos. Fire is one of the change agents on the Cape Peninsula (Photo: Shutterstock/Cathy Withers-Clarke)

Inclusion in innovative new global programme

This project was recently selected for inclusion within an innovative new programme run by the Group on Earth Observations (GEO) and Google Earth Engine. With their help we hope to turn our prototype into a user-friendly, yet powerful online application that is of great use to biodiversity managers and researchers.

The beauty of this approach is that it is highly versatile, providing a useful management tool while allowing us to collect data on the impacts of change agents for research in ecology and earth system science. We are also exploring using it to predict aspects of ecosystem structure and function such as biomass, fire return interval and the influence of vegetation on hydrology.

Figure 3: The first 180 days of post-fire vegetation growth at Jonkershoek in the Western Cape Province.